Trevor Manz, PhD

Biography

Research Fellow in Biomedical Informatics

Trevor is a postdoctoral research fellow in the HIDIVE lab. He earned his PhD in Biomedical Informatics from Harvard Medical School as an NSF Graduate Research Fellow, focusing on composable visualization tools for genomics and microscopy. Previously, he completed an MPhil in Computational Biology at Cambridge. His work aims to make visualization systems more accessible for low-code and computational researchers.

News

• Welcome to Trevor Manz, Angela Chen, and Lina Chi!
• Papers, Posters, and Presentations at IEEE VIS 2019
• IEEE VIS 2019 Best Short Paper Award for Periphery Plots
• Viv Image Visualization Library Preprint Released
• First Data Release of HuBMAP
• Open Source Software Contributions
• Viv Paper Published in Nature Methods
• IEEE VIS 2024

Publications

• Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)
• Vitessce: a framework for integrative visualization of multi-modal and spatially-resolved single-cell data
• Use-Coordination: Model, Grammar, and Library for Implementation of Coordinated Multiple Views
• Design Space and Declarative Grammar for 3D Genomic Data Visualization
• Chromoscope: interactive multiscale visualization for structural variation in human genomes
• Viv: Multiscale Visualization of High-Resolution Multiplexed Bioimaging Data on the Web
• Any notebook served: authoring and sharing reusable interactive widgets
• anywidget: reusable widgets for interactive analysis and visualization in computational notebooks
• A General Framework for Comparing Embedding Visualizations Across Class-Label Hierarchies
• Gos: a declarative library for interactive genomics visualization in Python
• OME-Zarr: a cloud-optimized bioimaging file format with international community support
• Periphery Plots for Contextualizing Heterogeneous Time-Based Charts